Detailed information of matrix profile MA1276.1

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Profile summary
Name: DOF3.5
Matrix ID: MA1276.1
Class: Other
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9SVC5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 125 67 201 372 0 0 0 0 251 25 99 ]
C [ 67 136 198 219 599 0 0 0 0 103 187 ]
G [ 131 48 31 6 0 0 0 0 0 4 206 ]
T [ 276 348 169 2 0 599 599 599 348 467 107 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1276.1 MA1276 1 DOF3.5 Arabidopsis thaliana
DOF Other
MA1276.2 MA1276 2 DOF3.5 Arabidopsis thaliana
DOF Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0262.1

ChIP-seq Centrality
-log(P-value): 6824.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0262.1

ChIP-seq Centrality
-log(P-value): 6350.41

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: