Detailed information of matrix profile MA1270.1

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Profile summary
Name: DOF3.2
Matrix ID: MA1270.1
Class: Other
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9M1E6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 274 288 327 328 397 363 267 153 120 496 465 600 599 600 0 58 285 323 278 ]
C [ 115 88 55 48 59 56 57 107 176 10 0 0 1 0 0 85 27 51 143 ]
G [ 134 92 92 120 55 98 189 211 175 55 0 0 0 0 600 138 111 151 78 ]
T [ 77 132 126 104 89 83 87 129 129 39 135 0 0 0 0 319 177 75 101 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1270.1 MA1270 1 DOF3.2 Arabidopsis thaliana
DOF Other
MA1270.2 MA1270 2 DOF3.2 Arabidopsis thaliana
DOF Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0261.1

ChIP-seq Centrality
-log(P-value): 11411.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0261.1

ChIP-seq Centrality
-log(P-value): 10450.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: