Detailed information of matrix profile MA1262.2

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Profile summary
Name: ERF2
Matrix ID: MA1262.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: O80338  
Source: 27203113
Comment: Also

Sequence logo

Frequency matrix

         
A [ 212 65 0 30 2 0 2 44 17 109 197 118 142 ]
C [ 52 353 0 0 550 0 0 509 9 85 190 27 63 ]
G [ 305 0 595 565 0 588 590 0 451 367 46 348 325 ]
T [ 26 177 0 0 43 7 3 42 118 34 162 102 65 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1262.1 MA1262 1 ERF2 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1262.2 MA1262 2 ERF2 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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