Detailed information of matrix profile MA1261.1

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Profile summary
Name: ERF122
Matrix ID: MA1261.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q38Q40  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 20 37 35 7 46 32 0 2 18 3 77 54 35 50 42 ]
C [ 67 91 9 106 89 0 138 136 0 80 16 14 57 42 15 ]
G [ 26 10 53 0 3 106 0 0 120 0 35 30 7 20 47 ]
T [ 25 0 41 25 0 0 0 0 0 55 10 40 39 26 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1261.1 MA1261 1 ERF122 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1261.2 MA1261 2 ERF122 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: