Detailed information of matrix profile MA1259.1

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Profile summary
Name: ERF023
Matrix ID: MA1259.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q1ECI2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 161 171 195 204 103 12 0 40 0 0 0 1 17 162 165 ]
C [ 75 90 116 47 73 64 0 1 572 0 0 46 7 67 149 ]
G [ 222 168 63 124 184 7 572 26 0 572 572 0 540 308 70 ]
T [ 114 143 198 197 212 489 0 505 0 0 0 525 8 35 188 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1259.1 MA1259 1 ERF023 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1259.2 MA1259 2 ERF023 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0228.1

ChIP-seq Centrality
-log(P-value): 1415.72

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0228.1

ChIP-seq Centrality
-log(P-value): 1425.14

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: