Detailed information of matrix profile MA1252.1

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Profile summary
Name: ERF086
Matrix ID: MA1252.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q6J9Q2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 86 84 148 61 39 59 0 1 8 2 3 13 8 104 194 ]
C [ 245 255 42 254 397 0 397 477 0 466 475 0 260 214 37 ]
G [ 46 26 150 37 0 256 61 0 469 1 0 459 11 34 123 ]
T [ 101 113 138 126 42 163 20 0 1 9 0 6 199 126 124 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1252.1 MA1252 1 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1252.2 MA1252 2 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0838.1

ChIP-seq Centrality
-log(P-value): 351.96

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0838.1

ChIP-seq Centrality
-log(P-value): 358.562

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: