Detailed information of matrix profile MA1252.1

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Profile summary
Name: ERF086
Matrix ID: MA1252.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q6J9Q2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 124 126 199 6 0 9 1 0 20 163 42 126 138 113 101 ]
C [ 123 34 11 459 0 1 469 0 61 256 0 37 150 26 46 ]
G [ 37 214 260 0 475 466 0 477 397 0 397 254 42 255 245 ]
T [ 194 104 8 13 3 2 8 1 0 59 39 61 148 84 86 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1252.1 MA1252 1 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1252.2 MA1252 2 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0838.1

ChIP-seq Centrality
-log(P-value): 351.96

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0838.1

ChIP-seq Centrality
-log(P-value): 358.562

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: