Detailed information of matrix profile MA1247.1

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Profile summary
Name: ERF087
Matrix ID: MA1247.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FZ90  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 105 126 183 65 53 70 14 1 9 2 0 10 6 86 260 ]
C [ 296 294 65 301 485 11 511 594 0 586 595 0 366 374 28 ]
G [ 69 42 165 64 15 314 55 0 586 1 0 577 11 38 178 ]
T [ 125 133 182 165 42 200 15 0 0 6 0 8 212 97 129 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1247.1 MA1247 1 ERF087 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1247.2 MA1247 2 ERF087 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0233.1

ChIP-seq Centrality
-log(P-value): 323.213

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0233.1

ChIP-seq Centrality
-log(P-value): 304.412

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: