Detailed information of matrix profile MA1238.2

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Profile summary
Name: ERF038
Matrix ID: MA1238.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9ZQP3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 575 259 123 1691 7 11 17 1631 16 1588 673 621 608 ]
C [ 277 811 1622 0 1892 1895 5 120 1883 35 562 465 277 ]
G [ 497 246 64 197 4 1 1882 30 4 202 280 272 494 ]
T [ 561 594 101 22 7 3 6 129 7 85 395 552 531 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1238.1 MA1238 1 ERF038 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1238.2 MA1238 2 ERF038 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1238.3 MA1238 3 ERF038 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0837.1

ChIP-seq Centrality
-log(P-value): 1615.62

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0837.1

ChIP-seq Centrality
-log(P-value): 1578.18

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: