Detailed information of matrix profile MA1238.2

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Profile summary
Name: ERF038
Matrix ID: MA1238.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9ZQP3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 531 552 395 85 7 129 6 3 7 22 101 594 561 ]
C [ 494 272 280 202 4 30 1882 1 4 197 64 246 497 ]
G [ 277 465 562 35 1883 120 5 1895 1892 0 1622 811 277 ]
T [ 608 621 673 1588 16 1631 17 11 7 1691 123 259 575 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1238.1 MA1238 1 ERF038 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1238.2 MA1238 2 ERF038 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1238.3 MA1238 3 ERF038 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0837.1

ChIP-seq Centrality
-log(P-value): 1615.62

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0837.1

ChIP-seq Centrality
-log(P-value): 1578.18

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: