| Name: | ERF054 |
| Matrix ID: | MA1232.1 |
| Class: | AP2/EREBP |
| Family: | ERF/DREB |
| Collection: | CORE |
| Taxon: | Plants |
| Species: | Arabidopsis thaliana |
| Data Type: | DAP-seq |
| Validation: | 15319480 |
| Uniprot ID: | Q9M0J3 |
| Source: | 27203113 |
| Comment: |
| A [ | 107 | 104 | 189 | 104 | 77 | 201 | 89 | 113 | 162 | 90 | 108 | 124 | 20 | 48 | 354 | 0 | 0 | 2 | 194 | 7 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 231 | 245 | 110 | 250 | 282 | 93 | 264 | 275 | 85 | 236 | 330 | 40 | 374 | 484 | 0 | 565 | 567 | 0 | 199 | 546 | ] |
| G [ | 85 | 97 | 153 | 92 | 83 | 158 | 82 | 71 | 178 | 62 | 30 | 190 | 96 | 12 | 213 | 2 | 0 | 564 | 21 | 3 | ] |
| T [ | 144 | 121 | 115 | 121 | 125 | 115 | 132 | 108 | 142 | 179 | 99 | 213 | 77 | 23 | 0 | 0 | 0 | 1 | 153 | 11 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1232.1 | MA1232 | 1 | ERF054 |
Arabidopsis thaliana
|
ERF/DREB | AP2/EREBP |  |
| MA1232.2 | MA1232 | 2 | ERF054 |
Arabidopsis thaliana
|
ERF/DREB | AP2/EREBP |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: