Detailed information of matrix profile MA1231.1

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Profile summary
Name: ERF15
Matrix ID: MA1231.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q8VYM0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 205 66 1 26 5 0 0 11 0 134 198 140 143 154 115 ]
C [ 33 322 0 0 575 0 0 550 8 69 172 9 51 193 76 ]
G [ 332 0 593 570 0 572 596 0 432 369 45 335 327 80 295 ]
T [ 26 208 2 0 16 24 0 35 156 24 181 112 75 169 110 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1231.1 MA1231 1 ERF15 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1231.2 MA1231 2 ERF15 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1231.3 MA1231 3 ERF15 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0331.1

ChIP-seq Centrality
-log(P-value): 11427.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0331.1

ChIP-seq Centrality
-log(P-value): 11037.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: