Detailed information of matrix profile MA1229.1

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Profile summary
Name: ERF034
Matrix ID: MA1229.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q8LBQ7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 167 135 161 48 33 446 0 0 0 528 0 448 196 179 164 ]
C [ 164 217 71 287 434 0 560 560 0 14 560 2 184 134 66 ]
G [ 78 63 150 71 19 114 0 0 560 0 0 85 89 55 154 ]
T [ 151 145 178 154 74 0 0 0 0 18 0 25 91 192 176 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1229.1 MA1229 1 ERF034 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1229.2 MA1229 2 ERF034 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: