Detailed information of matrix profile MA1223.1

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Profile summary
Name: ERF035
Matrix ID: MA1223.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9M210  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 30 38 507 0 0 0 585 0 566 222 233 211 178 143 ]
C [ 323 472 0 585 585 0 0 585 0 213 75 72 122 177 ]
G [ 71 19 78 0 0 585 0 0 16 76 41 104 88 65 ]
T [ 161 56 0 0 0 0 0 0 3 74 236 198 197 200 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1223.1 MA1223 1 ERF035 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1223.2 MA1223 2 ERF035 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0665.1

ChIP-seq Centrality
-log(P-value): 12685.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0665.1

ChIP-seq Centrality
-log(P-value): 12685.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: