Detailed information of matrix profile MA1219.1

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Profile summary
Name: ERF011
Matrix ID: MA1219.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 84 4 125 1 0 5 0 12 148 217 105 168 145 110 147 ]
C [ 100 1 0 580 0 0 92 7 44 153 39 65 129 46 75 ]
G [ 101 594 201 0 598 595 0 576 365 37 352 285 96 343 305 ]
T [ 315 1 274 19 2 0 508 5 43 193 104 82 230 101 73 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1219.1 MA1219 1 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1219.2 MA1219 2 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1219.3 MA1219 3 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0318.1

ChIP-seq Centrality
-log(P-value): 22622.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0318.1

ChIP-seq Centrality
-log(P-value): 23503.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: