Detailed information of matrix profile MA1219.1

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Profile summary
Name: ERF011
Matrix ID: MA1219.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 73 101 230 82 104 193 43 5 508 0 2 19 274 1 315 ]
C [ 305 343 96 285 352 37 365 576 0 595 598 0 201 594 101 ]
G [ 75 46 129 65 39 153 44 7 92 0 0 580 0 1 100 ]
T [ 147 110 145 168 105 217 148 12 0 5 0 1 125 4 84 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1219.1 MA1219 1 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1219.2 MA1219 2 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1219.3 MA1219 3 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0318.1

ChIP-seq Centrality
-log(P-value): 22622.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0318.1

ChIP-seq Centrality
-log(P-value): 23503.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: