Detailed information of matrix profile MA1214.2

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Profile summary
Name: ATHB-40
Matrix ID: MA1214.2
Class: Homeo
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: O23208  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 102 498 600 0 169 600 0 0 49 96 103 ]
C [ 397 41 0 0 25 0 0 0 0 68 68 ]
G [ 9 5 0 0 18 0 0 0 530 325 25 ]
T [ 92 56 0 600 388 0 600 600 21 111 404 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1214.1 MA1214 1 ATHB-40 Arabidopsis thaliana
HD-ZIP Homeo
MA1214.2 MA1214 2 ATHB-40 Arabidopsis thaliana
HD-ZIP Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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