Detailed information of matrix profile MA1213.1

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Profile summary
Name: ATHB-21
Matrix ID: MA1213.1
Class: Homeo
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607 11247607
Uniprot ID: Q9ZU70  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 187 129 376 152 2 597 597 0 286 597 0 75 131 185 ]
C [ 95 260 44 283 565 0 0 0 27 0 0 5 16 94 ]
G [ 175 124 72 45 0 0 0 0 26 0 0 50 319 199 ]
T [ 140 84 105 117 30 0 0 597 258 0 597 467 131 119 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1213.1 MA1213 1 ATHB-21 Arabidopsis thaliana
PLINC Homeo
MA1213.2 MA1213 2 ZHD3 Arabidopsis thaliana
PLINC Homeo
MA1213.3 MA1213 3 ZHD3 Arabidopsis thaliana
PLINC Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0287.1

ChIP-seq Centrality
-log(P-value): 15825.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0287.1

ChIP-seq Centrality
-log(P-value): 15825.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: