Detailed information of matrix profile MA1212.1

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Profile summary
Name: ATHB-13
Matrix ID: MA1212.1
Class: Homeo
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q8LC03  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 160 142 487 598 0 6 600 1 0 215 246 ]
C [ 109 187 48 0 0 1 0 0 0 0 70 ]
G [ 62 70 2 2 0 109 0 0 0 295 147 ]
T [ 269 201 63 0 600 484 0 599 600 90 137 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1212.1 MA1212 1 ATHB-13 Arabidopsis thaliana
HD-ZIP Homeo
MA1212.2 MA1212 2 ATHB-13 Arabidopsis thaliana
HD-ZIP Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0284.1

ChIP-seq Centrality
-log(P-value): 41624.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0284.1

ChIP-seq Centrality
-log(P-value): 40865.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: