Detailed information of matrix profile MA1211.1

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Profile summary
Name: ATHB-X
Matrix ID: MA1211.1
Class: Homeo
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: A9Z1E8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 103 0 584 595 0 45 595 0 27 219 114 ]
C [ 191 373 11 0 0 308 0 0 8 15 73 ]
G [ 105 0 0 0 0 5 0 0 13 234 216 ]
T [ 196 222 0 0 595 237 0 595 547 127 192 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1211.1 MA1211 1 ATHB-X Arabidopsis thaliana
HD-ZIP Homeo
MA1211.2 MA1211 2 ATHB-X Arabidopsis thaliana
HD-ZIP Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0286.1

ChIP-seq Centrality
-log(P-value): 1949.45

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0286.1

ChIP-seq Centrality
-log(P-value): 1929.64

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: