Detailed information of matrix profile MA1199.1

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Profile summary
Name: AGL16
Matrix ID: MA1199.1
Class: MADS
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: A2RVQ5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 37 152 25 0 139 292 410 287 235 189 61 0 279 404 360 ]
C [ 8 12 393 356 135 23 4 0 40 23 0 0 28 3 4 ]
G [ 15 44 0 0 35 59 4 0 77 83 357 418 11 0 19 ]
T [ 358 210 0 62 109 44 0 131 66 123 0 0 100 11 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1199.1 MA1199 1 AGL16 Arabidopsis thaliana
MIKC MADS
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: