Detailed information of matrix profile MA1197.1

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Profile summary
Name: CAMTA1
Matrix ID: MA1197.1
Class: GCM
Family: CAMTA
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FY74  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 133 174 151 595 0 20 0 0 1 55 77 124 ]
C [ 170 156 326 3 598 0 598 0 285 132 45 117 ]
G [ 58 33 58 0 0 578 0 598 140 6 46 56 ]
T [ 237 235 63 0 0 0 0 0 172 405 430 301 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1197.1 MA1197 1 CAMTA1 Arabidopsis thaliana
CAMTA GCM
MA1197.2 MA1197 2 CAMTA1 Arabidopsis thaliana
CAMTA GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0312.1

ChIP-seq Centrality
-log(P-value): 5873.81

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0312.1

ChIP-seq Centrality
-log(P-value): 5763.96

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: