Detailed information of matrix profile MA1192.1

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Profile summary
Name: DIV1
Matrix ID: MA1192.1
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 198 187 307 321 59 59 1 1 580 0 5 31 258 186 282 ]
C [ 131 108 65 41 259 443 1 0 0 0 575 313 57 142 25 ]
G [ 63 53 55 62 36 53 0 0 0 0 0 7 47 65 27 ]
T [ 188 232 153 156 226 25 578 579 0 580 0 229 218 187 246 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1192.1 MA1192 1 DIV1 Arabidopsis thaliana
MYB-related Tryptophan
MA1192.2 MA1192 2 DIV1 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0442.1

ChIP-seq Centrality
-log(P-value): 7201.53

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0442.1

ChIP-seq Centrality
-log(P-value): 7132.43

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: