Detailed information of matrix profile MA1190.1

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Profile summary
Name: RVE5
Matrix ID: MA1190.1
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: C0SVG5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 221 311 424 572 598 598 48 599 0 0 26 ]
C [ 120 83 26 0 0 0 0 0 0 599 36 ]
G [ 105 107 33 0 0 1 0 0 0 0 4 ]
T [ 153 98 116 27 1 0 551 0 599 0 533 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1190.1 MA1190 1 RVE5 Arabidopsis thaliana
MYB-related Tryptophan
MA1190.2 MA1190 2 RVE5 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0263.1

ChIP-seq Centrality
-log(P-value): 16756.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0263.1

ChIP-seq Centrality
-log(P-value): 16936.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: