Detailed information of matrix profile MA1182.1

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Profile summary
Name: RVE8
Matrix ID: MA1182.1
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8RWU3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 229 220 258 399 541 593 591 3 593 0 0 57 ]
C [ 123 133 92 35 0 0 0 0 0 0 593 38 ]
G [ 96 73 111 44 2 0 2 0 0 0 0 8 ]
T [ 145 167 132 115 50 0 0 590 0 593 0 490 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1182.1 MA1182 1 RVE8 Arabidopsis thaliana
MYB-related Tryptophan
MA1182.2 MA1182 2 RVE8 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0257.1

ChIP-seq Centrality
-log(P-value): 23327.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0257.1

ChIP-seq Centrality
-log(P-value): 24473.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: