Detailed information of matrix profile MA1172.1

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Profile summary
Name: MYB3R5
Matrix ID: MA1172.1
Class: Tryptophan
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q6R032  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 37 562 564 0 0 0 19 146 416 161 267 213 158 130 134 ]
C [ 291 0 0 566 0 0 154 224 50 127 40 19 48 65 97 ]
G [ 0 0 2 0 566 546 4 0 59 79 56 22 21 65 77 ]
T [ 238 4 0 0 0 20 389 196 41 199 203 312 339 306 258 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1172.1 MA1172 1 MYB3R5 Arabidopsis thaliana
MYB Tryptophan
MA1172.2 MA1172 2 MYB3R5 Arabidopsis thaliana
MYB Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0364.1

ChIP-seq Centrality
-log(P-value): 7365.29

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0364.1

ChIP-seq Centrality
-log(P-value): 7381.88

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: