Detailed information of matrix profile MA1171.1

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Profile summary
Name: MYB52
Matrix ID: MA1171.1
Class: Tryptophan
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q6R0C4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 27 35 35 32 100 0 0 0 0 0 81 ]
C [ 39 10 7 16 0 109 95 0 0 0 0 ]
G [ 12 29 17 15 0 0 14 109 0 0 10 ]
T [ 31 35 50 46 9 0 0 0 109 109 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1171.1 MA1171 1 MYB52 Arabidopsis thaliana
MYB Tryptophan
MA1171.2 MA1171 2 MYB52 Arabidopsis thaliana
MYB Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: