Detailed information of matrix profile MA1168.1

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Profile summary
Name: MYR2
Matrix ID: MA1168.1
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SQQ9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 225 255 216 438 585 0 598 2 2 1 0 156 147 142 ]
C [ 131 102 33 55 0 0 0 0 0 597 239 174 103 115 ]
G [ 96 131 241 20 0 310 0 0 10 0 97 62 33 84 ]
T [ 146 110 108 85 13 288 0 596 586 0 262 206 315 257 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1168.1 MA1168 1 MYR2 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1168.2 MA1168 2 MYR2 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0256.1

ChIP-seq Centrality
-log(P-value): 26703.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0256.1

ChIP-seq Centrality
-log(P-value): 25941.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: