Detailed information of matrix profile MA1166.2

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Profile summary
Name: PHL12
Matrix ID: MA1166.2
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8VYI2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 19 102 105 0 104 0 5 0 0 2 5 17 ]
C [ 0 0 0 0 1 0 1 101 53 44 17 12 ]
G [ 86 0 0 22 0 0 0 0 10 16 3 9 ]
T [ 0 3 0 83 0 105 99 4 42 43 80 67 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1166.1 MA1166 1 PHL12 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1166.2 MA1166 2 PHL12 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: