Detailed information of matrix profile MA1150.1

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Profile summary
Name: RORB
Matrix ID: MA1150.1
Class: Nuclear
Family: Thyroid
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 25500868
Uniprot ID: Q92753  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 785 526 233 53 602 16 32 28 47 896 205 ]
C [ 14 26 162 165 14 25 13 146 781 15 326 ]
G [ 29 24 201 235 358 907 928 50 17 63 145 ]
T [ 172 425 403 547 26 52 27 776 155 26 324 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1150.1 MA1150 1 RORB Homo sapiens
Thyroid Nuclear
MA1150.2 MA1150 2 RORB Homo sapiens
Thyroid Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0830.1

ChIP-seq Centrality
-log(P-value): 954.469

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0830.1

ChIP-seq Centrality
-log(P-value): 998.678

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: