Detailed information of matrix profile MA1149.1

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Profile summary
Name: RARA::RXRG
Matrix ID: MA1149.1
Class: Nuclear
Family: Thyroid::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 10698945
Uniprot ID: P10276   P48443  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 345 496 13 11 5 18 874 272 215 211 344 348 495 26 12 60 73 702 ]
C [ 113 38 3 3 15 831 5 239 249 212 199 133 90 4 5 112 696 53 ]
G [ 413 460 954 828 71 58 111 154 320 272 231 397 390 927 815 226 97 206 ]
T [ 129 6 30 158 909 93 10 334 215 305 227 121 25 43 169 601 135 40 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1149.1 MA1149 1 RARA::RXRG Homo sapiens
Thyroid::RXR-related Nuclear
MA1149.2 MA1149 2 RARA::RXRG Homo sapiens
Thyroid::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: