Detailed information of matrix profile MA1149.1

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Profile summary
Name: RARA::RXRG
Matrix ID: MA1149.1
Class: Nuclear
Family: Thyroid::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 10698945
Uniprot ID: P10276   P48443  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 40 135 601 169 43 25 121 227 305 215 334 10 93 909 158 30 6 129 ]
C [ 206 97 226 815 927 390 397 231 272 320 154 111 58 71 828 954 460 413 ]
G [ 53 696 112 5 4 90 133 199 212 249 239 5 831 15 3 3 38 113 ]
T [ 702 73 60 12 26 495 348 344 211 215 272 874 18 5 11 13 496 345 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1149.1 MA1149 1 RARA::RXRG Homo sapiens
Thyroid::RXR-related Nuclear
MA1149.2 MA1149 2 RARA::RXRG Homo sapiens
Thyroid::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: