Detailed information of matrix profile MA1148.2

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Profile summary
Name: PPARA::RXRA
Matrix ID: MA1148.2
Class: Nuclear
Family: Thyroid::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 8386511
Uniprot ID: P19793   Q07869  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 548 431 247 61 492 68 80 42 131 887 669 807 111 18 17 90 689 ]
C [ 140 73 211 94 95 19 15 157 445 16 24 25 16 14 49 598 37 ]
G [ 108 60 332 238 370 843 856 245 201 67 208 143 862 784 115 146 230 ]
T [ 204 437 210 608 42 71 49 556 223 30 99 25 11 184 818 166 43 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1148.1 MA1148 1 PPARA::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
MA1148.2 MA1148 2 PPARA::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: