Detailed information of matrix profile MA1148.1

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Profile summary
Name: PPARA::RXRA
Matrix ID: MA1148.1
Class: Nuclear
Family: Thyroid::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 8386511
Uniprot ID: P19793   Q07869  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 298 43 166 818 184 11 25 99 30 223 556 49 71 42 608 210 437 204 ]
C [ 243 230 146 115 784 862 143 208 67 201 245 856 843 370 238 332 60 108 ]
G [ 237 37 598 49 14 16 25 24 16 445 157 15 19 95 94 211 73 140 ]
T [ 222 689 90 17 18 111 807 669 887 131 42 80 68 492 61 247 431 548 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1148.1 MA1148 1 PPARA::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
MA1148.2 MA1148 2 PPARA::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: