Detailed information of matrix profile MA1147.1

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Profile summary
Name: NR4A2::RXRA
Matrix ID: MA1147.1
Class: Nuclear
Family: NGFI-B-related::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 7705655
Uniprot ID: P19793   P43354  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 244 437 20 11 3 12 924 604 27 138 691 139 46 29 130 ]
C [ 180 23 4 2 17 836 5 87 343 31 128 804 924 348 371 ]
G [ 473 535 937 830 54 82 69 60 38 824 134 7 11 124 212 ]
T [ 104 5 40 157 926 70 2 248 592 7 46 51 20 498 288 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1147.1 MA1147 1 NR4A2::RXRA Homo sapiens
NGFI-B-related::RXR-related Nuclear
MA1147.2 MA1147 2 NR4A2::RXRA Homo sapiens
NGFI-B-related::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: