Detailed information of matrix profile MA1146.1

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Profile summary
Name: NR1H4::RXRA
Matrix ID: MA1146.1
Class: Nuclear
Family: Thyroid::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 10744760
Uniprot ID: P19793   Q96RI1  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 380 521 51 83 48 37 838 660 17 100 826 324 19 11 154 ]
C [ 212 71 38 9 78 753 48 75 249 13 101 646 937 280 451 ]
G [ 313 383 798 773 112 102 92 121 13 875 49 9 15 55 172 ]
T [ 95 25 113 134 763 108 23 144 720 11 24 22 29 653 223 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1146.1 MA1146 1 NR1H4::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
MA1146.2 MA1146 2 NR1H4::RXRA Homo sapiens
Thyroid::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: