Detailed information of matrix profile MA1112.2

  1. Home
  2. Matrix > MA1112.2

Profile summary
Name: NR4A1
Matrix ID: MA1112.2
Class: Nuclear
Family: NGFI-B-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12082103
Uniprot ID: P22736  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3484 4463 14313 15268 15684 427 300 365 70 15126 4456 5239 ]
C [ 3283 3563 236 117 62 92 166 824 14949 151 3987 3370 ]
G [ 4159 3380 823 333 128 12434 14964 1358 151 329 4075 3887 ]
T [ 5001 4521 555 209 53 2974 497 13380 757 321 3409 3431 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1112.1 MA1112 1 NR4A1 Homo sapiens
NGFI-B-related Nuclear
MA1112.2 MA1112 2 NR4A1 Homo sapiens
NGFI-B-related Nuclear
MA1112.3 MA1112 3 NR4A1 Homo sapiens
NGFI-B-related Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0145.2

ChIP-seq Centrality
-log(P-value): 3172.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0145.2

ChIP-seq Centrality
-log(P-value): 3096.33

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: