Detailed information of matrix profile MA1112.1

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Profile summary
Name: NR4A1
Matrix ID: MA1112.1
Class: Nuclear
Family: NGFI-B-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12082103
Uniprot ID: P22736  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 2464 5681 8205 8147 22 34 17 45 6397 2019 ]
C [ 1742 440 12 163 189 17 28 8319 418 2335 ]
G [ 1789 1245 72 15 8009 8314 21 0 861 2012 ]
T [ 2386 1015 92 56 161 16 8315 17 705 2015 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1112.1 MA1112 1 NR4A1 Homo sapiens
NGFI-B-related Nuclear
MA1112.2 MA1112 2 NR4A1 Homo sapiens
NGFI-B-related Nuclear
MA1112.3 MA1112 3 NR4A1 Homo sapiens
NGFI-B-related Nuclear
     

-log(P-value) = 1782.87

TFFM details

TFFM ID: TFFM0145.1

ChIP-seq Centrality
-log(P-value): 3633.56

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0145.1

ChIP-seq Centrality
-log(P-value): 3597.0

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: