Detailed information of matrix profile MA1104.1

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Profile summary
Name: GATA6
Matrix ID: MA1104.1
Class: Other
Family: C4-GATA-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8321207
Uniprot ID: Q92908  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 4526 4764 682 420 362 716 17922 124 52 2112 3305 4976 5153 ]
C [ 3798 4465 3554 15490 345 205 262 154 18286 221 5168 4600 4256 ]
G [ 3369 3098 1873 1788 79 186 139 122 102 229 5000 2976 3899 ]
T [ 6957 6323 12541 952 17864 17543 327 18250 210 16088 5177 6098 5342 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1104.1 MA1104 1 GATA6 Homo sapiens
C4-GATA-related Other
MA1104.2 MA1104 2 GATA6 Homo sapiens
C4-GATA-related Other
MA1104.3 MA1104 3 GATA6 Homo sapiens
C4-GATA-related Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0137.1

ChIP-seq Centrality
-log(P-value): 11283.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0137.1

ChIP-seq Centrality
-log(P-value): 11080.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: