Detailed information of matrix profile MA1100.1

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Profile summary
Name: ASCL1
Matrix ID: MA1100.1
Class: Basic
Family: MyoD/ASC-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 31086315
Uniprot ID: P50553  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 1269 1693 1002 23 6856 21 48 96 26 27 733 899 1116 ]
C [ 2478 1718 3523 6987 72 523 6703 75 78 6639 1260 2029 2607 ]
G [ 1772 2164 2193 24 69 6343 280 61 6920 174 692 2808 1815 ]
T [ 1533 1477 334 18 55 165 21 6820 28 212 4367 1316 1514 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1100.1 MA1100 1 ASCL1 Homo sapiens
MyoD/ASC-related Basic
MA1100.2 MA1100 2 ASCL1 Homo sapiens
MyoD/ASC-related Basic
MA1100.3 MA1100 3 ASCL1 Homo sapiens
MyoD/ASC-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0131.1

ChIP-seq Centrality
-log(P-value): 21016.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0131.1

ChIP-seq Centrality
-log(P-value): 20879.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: