Detailed information of matrix profile MA1081.1

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Profile summary
Name: WRKY25
Matrix ID: MA1081.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11449049
Uniprot ID: O22921  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 105 39 0 0 999 0 0 323 ]
C [ 79 58 0 0 0 999 734 118 ]
G [ 631 0 0 999 0 0 0 500 ]
T [ 184 903 999 0 0 0 265 59 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1081.1 MA1081 1 WRKY25 Arabidopsis thaliana
WRKY GCM
MA1081.2 MA1081 2 WRKY25 Arabidopsis thaliana
WRKY GCM
MA1081.3 MA1081 3 WRKY25 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0418.1

ChIP-seq Centrality
-log(P-value): 11982.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0418.1

ChIP-seq Centrality
-log(P-value): 12341.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: