Detailed information of matrix profile MA1079.1

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Profile summary
Name: WRKY21
Matrix ID: MA1079.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11449049
Uniprot ID: O04336  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 203 120 47 44 1 904 39 103 260 247 ]
C [ 429 65 162 21 0 2 910 407 224 249 ]
G [ 209 607 10 66 999 4 0 87 195 223 ]
T [ 159 208 780 869 0 91 51 403 321 281 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1079.1 MA1079 1 WRKY21 Arabidopsis thaliana
WRKY GCM
MA1079.2 MA1079 2 WRKY21 Arabidopsis thaliana
WRKY GCM
MA1079.3 MA1079 3 WRKY21 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0415.1

ChIP-seq Centrality
-log(P-value): 3188.67

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0415.1

ChIP-seq Centrality
-log(P-value): 3334.43

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: