Detailed information of matrix profile MA1065.3

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Profile summary
Name: TCP20
Matrix ID: MA1065.3
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LSD5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 106 14 81 4 38 274 16 3 9 886 45 ]
C [ 60 61 4 0 4 159 914 962 877 12 767 ]
G [ 769 8 876 962 915 158 3 1 7 53 52 ]
T [ 35 887 9 4 13 379 37 4 77 19 106 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1065.1 MA1065 1 TCP20 Arabidopsis thaliana
TCP
MA1065.2 MA1065 2 TCP20 Arabidopsis thaliana
TCP
MA1065.3 MA1065 3 TCP20 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: