Detailed information of matrix profile MA1062.1

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Profile summary
Name: TCP15
Matrix ID: MA1062.1
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 21241251
Uniprot ID: Q9C9L2  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 12 3 9 7 36 30 2 14 ]
C [ 20 36 2 1 6 771 989 978 ]
G [ 962 12 986 990 950 138 3 2 ]
T [ 6 949 3 2 8 60 5 6 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1062.1 MA1062 1 TCP15 Arabidopsis thaliana
TCP
MA1062.2 MA1062 2 TCP15 Arabidopsis thaliana
TCP
MA1062.3 MA1062 3 TCP15 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0242.1

ChIP-seq Centrality
-log(P-value): 2825.67

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0242.1

ChIP-seq Centrality
-log(P-value): 2966.48

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: