Detailed information of matrix profile MA1059.1

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Profile summary
Name: SPL5
Matrix ID: MA1059.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q9S758  
Source: 25215497
Comment: No

Sequence logo

Frequency matrix

         
A [ 296 188 79 15 0 927 66 342 354 ]
C [ 155 575 778 0 6 15 739 229 290 ]
G [ 299 59 60 974 67 37 53 195 172 ]
T [ 250 178 84 10 926 22 142 234 185 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1059.1 MA1059 1 SPL5 Arabidopsis thaliana
SBP C3H(C),C2HC
MA1059.2 MA1059 2 SPL5 Arabidopsis thaliana
SBP C3H(C),C2HC
MA1059.3 MA1059 3 SPL5 Arabidopsis thaliana
SBP C3H(C),C2HC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: