Detailed information of matrix profile MA1059.1

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Profile summary
Name: SPL5
Matrix ID: MA1059.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q9S758  
Source: 25215497
Comment: No

Sequence logo

Frequency matrix

         
A [ 185 234 142 22 926 10 84 178 250 ]
C [ 172 195 53 37 67 974 60 59 299 ]
G [ 290 229 739 15 6 0 778 575 155 ]
T [ 354 342 66 927 0 15 79 188 296 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1059.1 MA1059 1 SPL5 Arabidopsis thaliana
SBP C3H(C),C2HC
MA1059.2 MA1059 2 SPL5 Arabidopsis thaliana
SBP C3H(C),C2HC
MA1059.3 MA1059 3 SPL5 Arabidopsis thaliana
SBP C3H(C),C2HC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: