Detailed information of matrix profile MA1057.1

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Profile summary
Name: SPL12
Matrix ID: MA1057.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q9S7P5  
Source: 25215497
Comment: No

Sequence logo

Frequency matrix

         
A [ 310 159 102 1 2 942 47 335 ]
C [ 151 538 744 0 5 12 761 211 ]
G [ 262 53 78 994 46 38 49 182 ]
T [ 278 249 76 5 947 8 143 272 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1057.1 MA1057 1 SPL12 Arabidopsis thaliana
SBP C3H(C),C2HC
MA1057.2 MA1057 2 SPL12 Arabidopsis thaliana
SBP C3H(C),C2HC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: