Detailed information of matrix profile MA1056.2

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Profile summary
Name: SPL11
Matrix ID: MA1056.2
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q9FZK0  
Source: 25215497
Comment: No

Sequence logo

Frequency matrix

         
A [ 271 185 21 0 0 1000 0 166 ]
C [ 78 773 936 0 0 0 1000 63 ]
G [ 78 21 21 1000 0 0 0 624 ]
T [ 572 21 21 0 1000 0 0 147 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1056.1 MA1056 1 SPL11 Arabidopsis thaliana
SBP C3H(C),C2HC
MA1056.2 MA1056 2 SPL11 Arabidopsis thaliana
SBP C3H(C),C2HC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: