Detailed information of matrix profile MA1044.1

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Profile summary
Name: NAC92
Matrix ID: MA1044.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24914054
Uniprot ID: Q9FKA0  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 229 170 23 123 186 0 91 91 22 80 227 318 ]
C [ 229 256 23 23 92 1000 0 0 22 282 227 227 ]
G [ 229 299 23 607 497 0 480 0 935 80 227 227 ]
T [ 314 274 932 247 224 0 430 909 22 559 318 227 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1044.1 MA1044 1 NAC92 Arabidopsis thaliana
NAC GCM
MA1044.2 MA1044 2 NAC92 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0532.1

ChIP-seq Centrality
-log(P-value): 1921.29

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0532.1

ChIP-seq Centrality
-log(P-value): 1948.86

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: