Detailed information of matrix profile MA1044.1

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Profile summary
Name: NAC92
Matrix ID: MA1044.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24914054
Uniprot ID: Q9FKA0  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 227 318 559 22 909 430 0 224 247 932 274 314 ]
C [ 227 227 80 935 0 480 0 497 607 23 299 229 ]
G [ 227 227 282 22 0 0 1000 92 23 23 256 229 ]
T [ 318 227 80 22 91 91 0 186 123 23 170 229 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1044.1 MA1044 1 NAC92 Arabidopsis thaliana
NAC GCM
MA1044.2 MA1044 2 NAC92 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0532.1

ChIP-seq Centrality
-log(P-value): 1921.29

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0532.1

ChIP-seq Centrality
-log(P-value): 1948.86

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: